Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858761.1_cds_XP_016514062.1_26550
CDS Infomation

[gene=LOC107830898] [db_xref=GeneID:107830898] [protein=probable auxin efflux carrier component 1c] [protein_id=XP_016514062.1] [location=join(10885..12082,12188..12434,12552..12637,13284..13441,14062..14138,14235..14301)] [gbkey=CDS]
Sequence

ATGATAACTTTATCTGATTTCTACCATGTTATGACTGCTGTTGTGCCACTTTATGTGGCT
ATGATATTAGCTTATGGTTCTGTTAAATGGTGGAAGATTTTTTCACCTGACCAGTGTTCT
GGTATTAACAGATTTGTTGCACTTTTCGCAGTTCCACTTCTCTCTTTCCACTTTATAGCT
GCTAATAATCCTTACACTATGAACATACGGTTCATTGCTGCTGACACTCTTCAGAAACTT
ATTGTTCTTGGAGCTCTTGCTATTTGGGCTAATTTTAGCAAAAGGGGTAGTTTAGAATGG
AGTATAACACTCTTTTCTTTATCAACTCTTCCAAATACTTTAGTTATGGGTATTCCTTTG
TTAAAAGGAATGTATGGTGATTTTTCAGGGAGTTTAATGGTTCAAATAGTTGTACTACAG
TGTATTATTTGGTACACTTTGATGCTTTTTATGTTTGAGTTCAGAGGTGCAAGGATGCTG
ATCTCTGAGCAATTTCCTGATACTGCTGGCTCAATTGTCTCAATCCATGTTGATTCTGAT
GTCATGTCATTAGATGGTAGACAAGTTTTGGAAACTGAAGCTGAAGTGAAAGAAGATGGA
AAACTTCATGTTACTGTGAGAAAATCAAATGCCTCAAGGTCTGATATATTTTCAAGAAGG
TCGCAGGGATTTTCTTCTACAACTCCAAGACCATCAAATTTAACAAATGCAGAGATTTAC
TCTCTACAATCTTCAAGAAATCCAACTCCAAGAGGGTCAAGTTTTAACCATACTGATTTT
TACTCAATGGTTGCTGGTGGGAGAAACTCAAACTTTGGTGCAAATGATGTTTATGGGATG
TCAGCTTCAAGAGGACCAACTCCTAGACCTTCAAATTATGAGGAAGAAAGTGGAAAATCA
AGATTTAATTACAACCATGGAGCTGCAGCACAACAAAGTAATACTAATAATAATACTACT
CATTATCCAGCTCCAAATCCTGGTATGTTTTCACCTAGTAATGGTGCAAAAGCAGTGGGT
TCTAACACTAATAACAAGAAAGGTAACAAAGGAGAGGAAGGTGGTAAAGATCTTCATATG
TTTGTTTGGAGTTCAAGTGCTTCTCCTGTTTCTGATGTATTTGGTGGTCATGATTATGGA
GCTAATTTAGACCAGAATACAGCTAAGGATGTAAGAGTACCTATCTCTCCTGGAAAAGTT
GAGGTGCAAAGAAACAATCAAGAAAACTACATGGAGAGAGATGACTTTAGCTTTGCAAAT
AGAGATGCAGAAATGAATATTCACAACCAAGAAGGTGAAAAAGGTGGAGAAAATAAAGCA
AAGGTTATGCCACCAACAAGTGTAATGACTAGGCTTATACTAATTATGGTTTGGAGGAAA
CTTATTAGAAATCCAAACACTTATTCAAGCTTGTTTGGTCTCACTTGGTCTCTAGTTTCA
TTCAGGTGGAATTTGAAGATGCCTGCTATAATTGCACAGTCCATATCTATATTGTCAGAT
GCAGGACTTGGCATGGCAATGTTCAGTCTAGGTCTGTTTATGGCTTTGCAACCAAGGATA
ATAGCATGTGGGAATTCTACAGCAGCTTTTGCTATGGCTGTGAGATTCCTTACAGGTCCA
GCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCCTTCGTGGAGTTCTCTTACACGTAGCC
ATTGTACAGGCAGCTCTACCCCAAGGAATTGTCCCCTTTGTCTTCGCCAAGGAATACAAC
GTTCACCCTGACATTCTTAGCACGGGTGTCATTTTTGGGATGTTGATTGCCTTGCCGATT
ACACTGGTCTACTACATTTTGATGGGACTTTAA

Peptide Sequence

PEP ID

XP_016514062.1
PEP Infomation

PREDICTED: probable auxin efflux carrier component 1c [Nicotiana tabacum]
Sequence

MITLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA
ANNPYTMNIRFIAADTLQKLIVLGALAIWANFSKRGSLEWSITLFSLSTLPNTLVMGIPL
LKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSD
VMSLDGRQVLETEAEVKEDGKLHVTVRKSNASRSDIFSRRSQGFSSTTPRPSNLTNAEIY
SLQSSRNPTPRGSSFNHTDFYSMVAGGRNSNFGANDVYGMSASRGPTPRPSNYEEESGKS
RFNYNHGAAAQQSNTNNNTTHYPAPNPGMFSPSNGAKAVGSNTNNKKGNKGEEGGKDLHM
FVWSSSASPVSDVFGGHDYGANLDQNTAKDVRVPISPGKVEVQRNNQENYMERDDFSFAN
RDAEMNIHNQEGEKGGENKAKVMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLVS
FRWNLKMPAIIAQSISILSDAGLGMAMFSLGLFMALQPRIIACGNSTAAFAMAVRFLTGP
AVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPI
TLVYYILMGL

Transcript Sequence

Gene sequence data has not been registered.